4.4. Available MT¶

Table of Contents

  • Solvants

  • Ions

4.4.1. Solvants¶

Water¶

Name

Variation

Variation

TIP4P/2005

Mean position on the negative charge

Mean position on the Oxygen atom

SPC/E

Classic SPC/E

  • 4.4.1.1. Water: TIP4P2005
  • 4.4.1.2. Water: TIP4P2005 - O
  • 4.4.1.3. Water: SPC/E

Simple alcohol¶

Name

OPLSAA

Other MD description

Methanol

All-Atom

Ethanol

All-Atom

  • 4.4.1.4. Methanol: OPLS/All Atoms
  • 4.4.1.5. Ethanol: OPLS/All Atoms

4.4.2. Ions¶

Atoms¶

Name

Full charge

Other MD description

Na

Full-charge

Cl

Full-charge

  • 4.4.2.1. Na+: Full charge
  • 4.4.2.2. Cl-: Full charge

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Navigation

  • 1. How to Install Frog?
  • 2. Tutorials
  • 3. Global Parameter
  • 4. Molecule Type
    • 4.1. How to create MT
    • 4.2. Molecule Type structure
    • 4.3. Single Molecule Parameter
    • 4.4. Available MT
  • 5. Diagram
  • 6. Optical Analysis
  • 7. Frog package

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