4.4.1.5. Ethanol: OPLS/All Atoms¶
To call this Molecule Type description in , use:
myMT = frog_class.MoleculeType(GP, 'Ethanol_OPLSAA', where_are_molecules)
4.4.1.5.1. Description¶
4.4.1.5.2. Test performed¶
4.4.1.5.3. Module¶
- Frog.Molecules.Ethanol_OPLSAA.compute_mean_position(L_pos)[source]
Define how to compute the ‘’mean position’’ of the molecule given its position.
- Frog.Molecules.Ethanol_OPLSAA.compute_rotational_matrix(L_pos)[source]
Define the matrix to go from the Molecular to the Laboratory frame: X_{lab} = Rot_matrix * X_{mol}
- Frog.Molecules.Ethanol_OPLSAA.electrostatic_description(pe_order, electro_neigh, L_pos=False)[source]
TODO
- Frog.Molecules.Ethanol_OPLSAA.info_molecule(smparameter)[source]
- Frog.Molecules.Ethanol_OPLSAA.info_molecule_typical_size()[source]
- Frog.Molecules.Ethanol_OPLSAA.qm_target_description(qmparameter, qmdescription, L_pos=False)[source]
TODO
- Frog.Molecules.Ethanol_OPLSAA.typical_geometry()[source]